Hello, we are new to Qiime! Really need your help! We are trying to import data from a paired end Illumina data, which is already demultiplexed and in fastq format by Fastqprocessor. We have files such as Sample1_S10_L001_R1_001.fastq Sample1_S10_L001_R2_001.fastq Sample2_S10_L001_R1_001.fastq …

How to import paired end illumina data?

Nicholas_Bokulich (Nicholas Bokulich) April 6, 2018, 12:20pm 2

Hi @savan,
See this post. Looks like your files aren’t gzipped, workarounds are suggested in that post.

I hope that helps!

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