Hello,
I have been having an issue importing this file mytaxon.txt (5.9 MB) as a reference taxonomy. The file was initially used to train an RDP classifier so I'm unsure of whether it has the right layout to be imported as is to QIIME... I was having issues with the reference sequences fasta but managed to change the case of the bases and get it uploaded as a .qza in the end.
I have got the error:
"There was a problem importing mytaxon.txt:
mytaxon.txt is not a(n) TSVTaxonomyFormat file"
From the code:
qiime tools import
--type 'FeatureData[Taxonomy]'
--input-path mytaxon.txt
--output-path co1_ref_taxonomy_TP.qza
And the error code:
There was a problem importing mytaxon.txt:
mytaxon.txt is not a(n) HeaderlessTSVTaxonomyFormat file
From the code:
qiime tools import
--type 'FeatureData[Taxonomy]'
--input-format HeaderlessTSVTaxonomyFormat
--input-path mytaxon.txt
--output-path co1_ref_taxonomy_TP.qza
I have tried converting the .txt file to a .biom file but am getting errors saying that "mytaxon.txt is not a BIOM file!"
If anyone could shed some light and give me a hand I'd be most pleased! 