Dear Qiime2 users, I am newbie to bioinformatic analysis and for qiime2 as well. We are using Ion torrent PGM platform for V4 16SrRNA region. After sequencing, output are all .fastq files (according to our samples) and one nomatch.fastq, kindly see the attachment ( [nomatch_fastq] . It seems our seq…

Hi @khemlalnirmalkar I have imported in QIIME2 my fastq files from PGM using the next command line: qiime tools import --type 'SampleData[SequencesWithQuality]' --input-path manifest_file.csv --output-path demux.qza --source-format SingleEndFastqManifestPhred33 You have the instructions t…

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How to do multiplex of Ion torrent sequences

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