Hello Colin,
Thanks for your reply.
I checked the "fastq manifest format" and as I understood this command is not gonaa work with my datas. Yes, I have one fastq file per sample please see the attachment fastq.png"
" but I don't have forward and reverse sequences separately. Each fastq data has data like please see the attachment
F8_fastq.png "
". I was looking the Qiime2 tutorial and it seems like this tutorial is for illumina sequences and in my case I am using Ion Torrent PGM and output is not same like illumina. I dont have barcode.fastq file and I am not able to proceed further.
Kindly help me to solve this issue.
Thanks,
Sincerely,
Khemlal
