I know this question may have been addressed previously but i am new to using Qiime and i would need help. I have my taxa plot but what do i do in order to group replicates as one so that the plot comes out as one plot per sample instead of one plot per replicate. I have 9 samples with 3 replicates (27 paired end samples). I have obtained the taxonomic box plots of the samples separately but I don’t know how to use the information of my 3 replicates together. Thank you in advance for your help! (Attached is a picture of the box plot obtained)
Please, check out this topic with similar question for the solution.
Thank you so much @timanix for your response, it was really helpful