Dear all,
I am going to use “Fastq manifest” formats to import my data. But I can’t know from the company that which one (illumina1.3 or illumina1.8) was used, can I tell from the fastq file? My data is like:
@M02419:285:000000000-B49GD:1:2106:22600:1714 2:N:0:ACTTGA
CGATGTGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCTCAGCGTCAGTTGTGTTCCAGTAAATCGCCTTCGCAATCGGTATTCCTTCTGATCTCTACGGATTTTACCCCTACACCAGAAATTCCATCTACCTCTCCCACACTCTAGGTATACAGTTTCAAAAGCAGTTCTATATTTAAGCTATAGGATTTCACTTCTGACTTATCTACCCGCCTAAACGCTCTTTACGCCCAGGTATTCCGAGTAACTCTTGCGTCCTCCGTATGACCACGGCTGCTGGCACGTC
+
CCCGGGGGGGGGGGGGGEGGFFFGGGGGGG9FGFFGGGGGGGGGGGGGGGCGGGGGGCEFGGGGGEFGGGGGGGFDEGFCFGEGGGGD:F7FFGF?DGGGGGGGACFDFGGCBFCC+@,E<,B,<?BFFG8FFCGCEEGGGGGEGGGE9EF,8DGEGGD,3DAD9BFFAE;;FF,@FFEECFFGGG9C9,,@,@9DE9FCFEGA9EGGFFCFGFF++@@=CC,:,=*@D?5);A4)2:5:+1C4=5E=F*)381:8E3)27>C++.94F3)7/34((,8,)-:2*-)451>?0)(-5<(##
Thanks for all the suggestions or idea!!!