My data is about effect of anti-cancer treatment for gut microbiota.
5 peoples were treated using same anti-cancer medicine and we produced before and after
gut metagenome data for each individual.
In the tutorial, using linear-mixed model in longitudinal, I can identify the effect of treatment.
on alpha diversity and etc. However, I also want to know what taxa were significantly effected
by anti-cancer treatment. I tried to find the tutorial about this case but I cannot find it.
I need some help.