Export genus reads


(Sandrine David) #1

Hello,

I use qiime2 for 6 months thanks for this tool. I wanted to know if it was possible to export the reads of a precise genus found by the taxa bar plot
Thanks for your answers
sdavid


(Nicholas Bokulich) #2

Yes! Use qiime taxa filter-seqs to select sequences classified to a particular genus. You can then visualize those sequences, merge with taxonomy using qiime metadata tabulate, or export them.


(Sandrine David) #4

thanks a lot
I’m going to try
Sdavid