Error whilst using v-search join pairs

[jwdebelius (Justine Debelius)]

Hi @lghuggins,

This is a guess, but are these the sequences from you rother post?

DADA2 fails to run due to 'Error in isBimeraDenovoTable'

Hi Nicholas, Thank you for help with this, the issue was whilst using a manifest to import the data, the R2 reads were automatically changed to R1s when transferring the manifest data from a spreadsheet, hence I was only importing the forward reads. Thanks again!

You might try setting your --p-truncqual which may trim your reads, but would get rid of the last 50 or so bases that seem to have issues.

Best,
Justine