Hi. I changed the names on purpose, so that was intended. This is what I ran and got:
(qiime2-2019.1) XXXXX:Heatmaps_problems ele010$ qiime feature-table heatmap \
> --i-table collapsed_table_level6.qza \
> --m-metadata-file metadata_forum.tsv \
> --m-metadata-column exacerb_kategori \
> --p-normalize \
> --p-cluster features \
> --o-visualization heatmap-genus.qzv \
> --verbose
Traceback (most recent call last):
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/q2cli/commands.py", line 274, in __call__
results = action(**arguments)
File "</Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/decorator.py:decorator-gen-333>", line 2, in heatmap
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/qiime2/sdk/action.py", line 231, in bound_callable
output_types, provenance)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/qiime2/sdk/action.py", line 427, in _callable_executor_
ret_val = self._callable(output_dir=temp_dir, **view_args)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/q2_feature_table/_heatmap/_visualizer.py", line 149, in heatmap
heatmap_plot.savefig(img_fp)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/seaborn/matrix.py", line 1013, in savefig
self.fig.savefig(*args, **kwargs)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/figure.py", line 2062, in savefig
self.canvas.print_figure(fname, **kwargs)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/backend_bases.py", line 2212, in print_figure
**kwargs)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/backends/backend_svg.py", line 1210, in print_svg
result = self._print_svg(filename, fh, **kwargs)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/backends/backend_svg.py", line 1240, in _print_svg
self.figure.draw(renderer)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/artist.py", line 55, in draw_wrapper
return draw(artist, renderer, *args, **kwargs)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/figure.py", line 1493, in draw
renderer, self, artists, self.suppressComposite)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/image.py", line 141, in _draw_list_compositing_images
a.draw(renderer)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/artist.py", line 55, in draw_wrapper
return draw(artist, renderer, *args, **kwargs)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/axes/_base.py", line 2635, in draw
mimage._draw_list_compositing_images(renderer, self, artists)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/image.py", line 141, in _draw_list_compositing_images
a.draw(renderer)
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/artist.py", line 60, in draw_wrapper
renderer.stop_rasterizing()
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/backends/backend_mixed.py", line 130, in stop_rasterizing
buffer, bounds = self._raster_renderer.tostring_rgba_minimized()
File "/Users/ele010/miniconda3/envs/qiime2-2019.1/lib/python3.6/site-packages/matplotlib/backends/backend_agg.py", line 144, in tostring_rgba_minimized
return np.array(region), extents
ValueError: negative dimensions are not allowed
Plugin error from feature-table:
negative dimensions are not allowed
See above for debug info.
(sorry for not formatting posts!!!)
Do you get the exact same error when you run it without metadata?
