Error when running DADA2

[Nicholas_Bokulich]

Hi @Zimtblatt,

@Zimtblatt

running DADA2 in R (return code -9)

This is a memory error. See here for support with this error on virtualbox:

DADA2 denoise-paired error: R (return code -9)

I am running QIIME2 2017.9 in a Virtual Box, and I ran the following command: qiime dada2 denoise-paired --i-demultiplexed-seqs demux-paired-end.qza --p-trim-left-f 0 --p-trim-left-r 0 --p-trunc-len-f 200 --p-trunc-len-r 200 --o-table table.qza --o-representative-sequences rep-seqs.qza And received this error: An error was encountered while running DADA2 in R (return code -9) please inspect stdout and stderr to learn more. I was looking at the forum, but most of things are abo…

Good luck!