I'm attempting to import manifest files to Qiime2 in order to convert fastq.gz files to .qza files for analysis. I made a draft manifest file with two fastq.gz files, and it worked great! However, when I tried the same code on a larger file of the same format, I got the following error message:
I tried fixing this by converting my .tsv file to a .csv UTF-8 file, but this did not work as the file needs to be .tsv. I'm not sure why this is occurring, these files are formatted the same as those which worked earlier. For reference, here is the formatting of my manifest file:
This format goes on for 81 samples. I'm wondering if there could be a formatting issue with the manifest file somewhere. Any help would be appreciated!