QIIME2 Version:
VirtualBox, qiime2-2020.2
Command:
qiime feature-classifier classify-consensus-vsearch --p-top-hits-only --i-reference-reads mCOI-id99-sequences.qza --i-reference-taxonomy mCOI-id99-taxa-Majority.qza --i-query …/…/…/sequences.qza --o-classification vsearch_id99_consensus_taxonomy.qza --verbose
Error Message:
Plugin error from feature-classifier:
‘Identifier 315 was reported in taxonomic search results, but was not present in the reference taxonomy.’
Description:
I have already checked to see if all IDs for reference sequences and taxonomy match via Excel. I have also run classify-consensus-blast: “qiime feature-classifier classify-consensus-blast --i-reference-reads mCOI-id99-sequences.qza --i-reference-taxonomy mCOI-id99-taxa-Majority.qza --p-maxaccepts 1 --p-perc-identity 0.99 --p-query-cov 0.9 --p-strand both --i-query …/…/…/sequences.qza --o-classification id99-majority-blast-taxonomy.qza” which has no error using the same reference sequences and taxonomy.
I am curious what this KeyError may be arising from.
Thanks!