I'm trying to perform longitudinal analysis on my data but I have an error.
The code that I used:
qiime longitudinal pairwise-differences
metadata_formula_milk.tsv (1.8 KB)
Plugin error from longitudinal:
metric must be a valid metadata or feature table column.
I can't understand my error.
Can someone help me??
Are you running the last vesrion of Qiime?
If yes, replace this parameter to
They renamed a column in the artifact
Thanks @timanix the problem was exactly that, also other metrics have changed? Where can I check?
Yeah, some of them. You can open a .qza file as an archive or export it, open data subdirectory and check column names.
and observed_otus -
Another convenient way (without exporting!) is to use
qiime metadata tabulate and this will allow you to visualize/search the results.
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