I want to use picrust on my machine using QIIME2 plugin, since it also not resource intensive task compare to full version of Picrust2.
- I followed the tutorial on QIIME 2 Library, but error.
- I decided to install it manually by following this tutorial https://github.com/picrust/picrust2/wiki/Manually-install-QIIME-2-plugin. it threw a permission error message when I ran
pip install -e ., something like
[Errno 13] Permission denied.
- So, I tried
sudo pip install -e ., it said that the plugin is successfully install, but error of
qiime picrust2 --help.
- Finally, I tried to change it from
pip install -e .to
python3 -m pip install -e .. It runs well but still can not see proper message of
qiime picrust2 --helpcommand
Thank you very much.