Hey there. I’m hoping to get some help importing data into QIIME2. I have received raw illumina sequences under the files R1.fastq.gz and R2.fastq.gz. There is an associated mapping file for each of these as well. According to the company which did the sequencing the format is as follows:
I’m having difficulty understanding how to bring this data into QIIME2. The manifest format seems to work only if it is oriented in all-forward or all-reverse directions. Is there any way that y’all know of that I can import these files?
Thanks so much for helping.