Dear community,
This is my first intervention here since I use QIIME2. I am provided with various datasets 16S, ITS since one year, and until now I did not encounter errors (other than due to my own mistakes) I was not able to deal with.
What I have done: After importing my sequences and running dada2 pipeline, everything seems OK. I then exported the qvz file for my rep-seqs but faced what let me without solution so far. I did not find info on this particular issue, anywhere.
In the table obtained, I get something different from what I used to obtain. Please see the attached print screen, a comparison between the current problem (left) and what I get in a normal situation (right):
- no link to blast the sequences
- no info on the sequence length
-etc
The 2 sets presented here comes from the same NGS source, and I used the same pipeline (despite the left is a 16S and the other ITS)
What could be the source for such a difference?
I restarted everything from scratch on a smaller set of samples but I get the same issue. I am stuck here.
Many thanks in advance for any help.
Best regards,
Guillaume
PS: I could provide a small dataset if it is needed