Dear Support team,
I am trying to get the DADA2 table for the Moving Pictures” tutorial using the same provided commands and pipeline.
qiime dada2 denoise-single \
--i-demultiplexed-seqs demux.qza
--p-trim-left 0
--p-trunc-len 120
--o-representative-sequences rep-seqs-dada2.qza
--o-table table-dada2.qza
--o-denoising-stats stats-dada2.qza
I've been trying so many times, the always I get this message!
Plugin error from dada2:
An error was encountered while running DADA2 in R (return code 1), please inspect stdout and stderr to learn more.
Debug info has been saved to /tmp/qiime2-q2cli-err-xq59ai0h.log
Also, here is the head of Plugin error from dada2:
An error was encountered while running DADA2 in R (return code 1), please inspect stdout and stderr to learn more.
Debug info has been saved to /tmp/qiime2-q2cli-err-xq59ai0h.log
Running external command line application(s). This may print messages to stdout and/or stderr.
The command(s) being run are below. These commands cannot be manually re-run as they will depend on temporary files that no longer exist.
Command: run_dada_single.R /tmp/qiime2-archive-p3m80pki/3fa671a8-dc38-4146-869e-cae4eb0a593c/data /tmp/tmpn2_umvjc/output.tsv.biom /tmp/tmpn2_umvjc/track.tsv /tmp/tmpn2_umvjc 120 0 2.0 2 Inf consensus 1.0 1 1000000 NULL 16
R version 3.5.1 (2018-07-02)
Loading required package: Rcpp
Error: package or namespace load failed for ‘dada2’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
there is no package called ‘GenomeInfoDbData’
Execution halted
Can you please help in this? Thanks!