Core-features from specific samples

How can I run the core-features command only on specific samples so that I am only seeing the core features within a specific group of samples, not within all the samples in my feature table?

The only solution I can think of is to start from the beginning and import only the raw reads which I want to run core-features on, but I’d rather not do that again. Plus I’d like to run core-features several times, each on a different group of samples within in my feature table, so having to do that multiple time would be insane.

Thanks in advance.

Hi @Alan_Chan.

No need to go back to the beginning! Have a look throughthis tutorial on filtering feature tables. It’ll show you how to filter your feature table based on samples, features etc.


This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.