Hello I have a quick question
I have classic OTU table (tabbed text) in text file.
I wish to change this file into .qzv file
I checked through qiime tools import but it seems like I can't find the right option
Could you pls tell me what could I do to change the file?
Thank you in advance for the help!!!
1 Convert your file into biom
biom convert -i OTU-table.txt -o feature-table.biom --table-type="OTU table" --to-hdf5
2 Import it into Qiime2
qiime tools import \
--input-path feature-table.biom \
--type 'FeatureTable[Frequency]' \
--input-format BIOMV210Format \
3 Convert to .qzv file if needed (metadata file is optional):
qiime feature-table summarize \
--i-table feature-table.qza \
--m-sample-metadata-file metadata.tsv \
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