Biplot with shortened taxa label?

User Support
,
5

Hi @DrL,

I'd suggest the following:

  1. Read through the tutorial on qiime rescript edit-taxonomy .... This should give you a few ideas on how you can edit / truncate your taxonomy to make them more amenable to figure generation.

  2. Use this modified taxonomy file as the input to the qiime taxa collapse ... command. Keep in mind you may need to alter --p-level to match the length of your new taxonomy strings.

  3. Follow the rest of your commands as you already have them.

Let us know if this works! :slight_smile:

4 Likes