Sure, I copy all this this here after, thanks for your time.
conda env remove -n qiime2-2021.2
wget https://data.qiime2.org/distro/core/qiime2-2021.2-py36-osx-conda.yml conda env create -n qiime2-2021.2 --file qiime2-2021.2-py36-osx-conda.yml OPTIONAL CLEANUP rm qiime2-2021.2-py36-osx-conda.yml
Blockquote
env | sort
AR=x86_64-apple-darwin13.4.0-ar
ARBHOME=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/lib/arb
ARBHOME_BACKUP=
AS=x86_64-apple-darwin13.4.0-as
BUILD=x86_64-apple-darwin13.4.0
CC=x86_64-apple-darwin13.4.0-clang
CC_FOR_BUILD=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-clang
CFLAGS=-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include
CHECKSYMS=x86_64-apple-darwin13.4.0-checksyms
CLANG=x86_64-apple-darwin13.4.0-clang
CLANGXX=x86_64-apple-darwin13.4.0-clang++
CMAKE_ARGS=-DCMAKE_AR=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-ar -DCMAKE_CXX_COMPILER_AR=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-ar -DCMAKE_C_COMPILER_AR=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-ar -DCMAKE_RANLIB=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-ranlib -DCMAKE_CXX_COMPILER_RANLIB=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-ranlib -DCMAKE_C_COMPILER_RANLIB=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-ranlib -DCMAKE_LINKER=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-ld -DCMAKE_STRIP=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-strip -DCMAKE_INSTALL_NAME_TOOL=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-install_name_tool -DCMAKE_LIBTOOL=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-libtool -DCMAKE_OSX_DEPLOYMENT_TARGET= -DCMAKE_BUILD_TYPE=Release -DCMAKE_OSX_SYSROOT=/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
CMAKE_PREFIX_PATH=:/Users/elifka/opt/miniconda3/envs/qiime2-2021.2
CONDA_BACKUP_HOST=MBP-de-Elif
CONDA_BUILD_SYSROOT=/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
CONDA_DEFAULT_ENV=qiime2-2021.2
CONDA_EXE=/Users/elifka/opt/miniconda3/bin/conda
CONDA_PREFIX=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2
CONDA_PREFIX_1=/Users/elifka/opt/miniconda3
CONDA_PROMPT_MODIFIER=(qiime2-2021.2)
CONDA_PYTHON_EXE=/Users/elifka/opt/miniconda3/bin/python
CONDA_SHLVL=2
CONDA_TOOLCHAIN_BUILD=x86_64-apple-darwin13.4.0
CONDA_TOOLCHAIN_HOST=x86_64-apple-darwin13.4.0
CPPFLAGS=-D_FORTIFY_SOURCE=2 -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include
CXX=x86_64-apple-darwin13.4.0-clang++
CXXFLAGS=-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -std=c++14 -fmessage-length=0 -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include
CXX_FOR_BUILD=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-clang++
DEBUG_CFLAGS=-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -Og -g -Wall -Wextra -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include
DEBUG_CXXFLAGS=-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -std=c++14 -fmessage-length=0 -Og -g -Wall -Wextra -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include
DEBUG_FFLAGS=-march=core2 -mtune=haswell -ftree-vectorize -fPIC -fstack-protector -O2 -pipe -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include -march=core2 -mtune=haswell -ftree-vectorize -fPIC -fstack-protector -O2 -pipe -Og -g -Wall -Wextra -fcheck=all -fbacktrace -fimplicit-none -fvar-tracking-assignments
DEBUG_FORTRANFLAGS=-march=core2 -mtune=haswell -ftree-vectorize -fPIC -fstack-protector -O2 -pipe -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include -march=core2 -mtune=haswell -ftree-vectorize -fPIC -fstack-protector -O2 -pipe -Og -g -Wall -Wextra -fcheck=all -fbacktrace -fimplicit-none -fvar-tracking-assignments
F77=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-gfortran
F90=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-gfortran
F95=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-gfortran
FC=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-gfortran
FC_FOR_BUILD=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/-gfortran
FFLAGS=-march=core2 -mtune=haswell -ftree-vectorize -fPIC -fstack-protector -O2 -pipe -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include
FORTRANFLAGS=-march=core2 -mtune=haswell -ftree-vectorize -fPIC -fstack-protector -O2 -pipe -isystem /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/include
GFORTRAN=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-gfortran
GSETTINGS_SCHEMA_DIR=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/share/glib-2.0/schemas
GSETTINGS_SCHEMA_DIR_CONDA_BACKUP=
HOME=/Users/elifka
HOST=x86_64-apple-darwin13.4.0
INDR=x86_64-apple-darwin13.4.0-indr
INSTALL_NAME_TOOL=x86_64-apple-darwin13.4.0-install_name_tool
JAVA_HOME=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2
JAVA_HOME_CONDA_BACKUP=
JAVA_LD_LIBRARY_PATH=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/lib/server
JAVA_LD_LIBRARY_PATH_BACKUP=
LC_CTYPE=UTF-8
LD=x86_64-apple-darwin13.4.0-ld
LDFLAGS=-Wl,-pie -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/lib -L/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/lib
LDFLAGS_LD=-pie -headerpad_max_install_names -dead_strip_dylibs -rpath /Users/elifka/opt/miniconda3/envs/qiime2-2021.2/lib -L/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/lib
LIBTOOL=x86_64-apple-darwin13.4.0-libtool
LIPO=x86_64-apple-darwin13.4.0-lipo
LOGNAME=elifka
LaunchInstanceID=AFB5D54A-588A-4D9D-BE19-D3854F842628
MESON_ARGS=--buildtype release
MPLBACKEND=Agg
NM=x86_64-apple-darwin13.4.0-nm
NMEDIT=x86_64-apple-darwin13.4.0-nmedit
OBJC=x86_64-apple-darwin13.4.0-clang
OBJC_FOR_BUILD=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/x86_64-apple-darwin13.4.0-clang
OLDPWD=/Users/elifka
OTOOL=x86_64-apple-darwin13.4.0-otool
PAGESTUFF=x86_64-apple-darwin13.4.0-pagestuff
PATH=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin:/Users/elifka/opt/miniconda3/condabin:/Library/Frameworks/Python.framework/Versions/3.8/bin:/Library/Frameworks/Python.framework/Versions/3.7/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin
PWD=/Users/elifka/Documents/Documents/AlgaePaper/outputs_qiita/output_deblur
PYTHONNOUSERSITE=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/lib/python*/site-packages/
RANLIB=x86_64-apple-darwin13.4.0-ranlib
REDO_PREBINDING=x86_64-apple-darwin13.4.0-redo_prebinding
RSTUDIO_WHICH_R=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/bin/R
R_LIBS_USER=/Users/elifka/opt/miniconda3/envs/qiime2-2021.2/lib/R/library/
SDKROOT=/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
SECURITYSESSIONID=186a7
SEGEDIT=x86_64-apple-darwin13.4.0-segedit
SEG_ADDR_TABLE=x86_64-apple-darwin13.4.0-seg_addr_table
SEG_HACK=x86_64-apple-darwin13.4.0-seg_hack
SHELL=/bin/zsh
SHLVL=1
SIZE=x86_64-apple-darwin13.4.0-size
SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.6Q0NBhAAau/Listeners
STRINGS=x86_64-apple-darwin13.4.0-strings
STRIP=x86_64-apple-darwin13.4.0-strip
TERM=xterm-256color
TERM_PROGRAM=Apple_Terminal
TERM_PROGRAM_VERSION=440
TERM_SESSION_ID=38B1A29B-0468-4692-A290-E0F76021E0F2
TMPDIR=/var/folders/h3/vt0n6y2534b35ss3dzf_037m0000gn/T/
USER=elifka
XPC_FLAGS=0x0
XPC_SERVICE_NAME=0
_=/usr/bin/env
_CE_CONDA=
_CE_M=
_CONDA_PYTHON_SYSCONFIGDATA_NAME=_sysconfigdata_x86_64_apple_darwin13_4_0
__CFBundleIdentifier=com.apple.Terminal
ac_cv_func_malloc_0_nonnull=yes
ac_cv_func_realloc_0_nonnull=yes
build_alias=x86_64-apple-darwin13.4.0
host_alias=x86_64-apple-darwin13.4.0
conda list
packages in environment at /Users/elifka/opt/miniconda3/envs/qiime2-2021.2:
Name Version Build Channel
_r-mutex 1.0.1 anacondar_1 conda-forge
appnope 0.1.2 py36h79c6626_1 conda-forge
arb-bio-tools 6.0.6 h82bc0eb_8 bioconda
argon2-cffi 20.1.0 py36h20b66c6_2 conda-forge
async_generator 1.10 py_0 conda-forge
attrs 20.3.0 pyhd3deb0d_0 conda-forge
backcall 0.2.0 pyh9f0ad1d_0 conda-forge
backports 1.0 py_2 conda-forge
backports.functools_lru_cache 1.6.1 py_0 conda-forge
bibtexparser 1.1.0 py_0 conda-forge
bioconductor-biobase 2.50.0 r40h8909d69_0 bioconda
bioconductor-biocgenerics 0.36.0 r40_0 bioconda
bioconductor-biocparallel 1.24.0 r40h64ad5ed_0 bioconda
bioconductor-biostrings 2.58.0 r40h8909d69_0 bioconda
bioconductor-dada2 1.18.0 r40h64ad5ed_0 bioconda
bioconductor-delayedarray 0.16.0 r40h8909d69_0 bioconda
bioconductor-genomeinfodb 1.26.0 r40_0 bioconda
bioconductor-genomeinfodbdata 1.2.4 r40_0 bioconda
bioconductor-genomicalignments 1.26.0 r40h8909d69_0 bioconda
bioconductor-genomicranges 1.42.0 r40h8909d69_0 bioconda
bioconductor-iranges 2.24.0 r40h8909d69_0 bioconda
bioconductor-matrixgenerics 1.2.0 r40_0 bioconda
bioconductor-rhtslib 1.22.0 r40h8909d69_0 bioconda
bioconductor-rsamtools 2.6.0 r40h64ad5ed_0 bioconda
bioconductor-s4vectors 0.28.0 r40h8909d69_0 bioconda
bioconductor-shortread 1.48.0 r40h64ad5ed_0 bioconda
bioconductor-summarizedexperiment 1.20.0 r40_0 bioconda
bioconductor-xvector 0.30.0 r40h8909d69_0 bioconda
bioconductor-zlibbioc 1.36.0 r40h8909d69_0 bioconda
biom-format 2.1.10 py36hb29be1e_0 conda-forge
blas 2.108 openblas conda-forge
blas-devel 3.9.0 8_openblas conda-forge
blast 2.10.1 pl526hce2a5c9_3 bioconda
bleach 3.3.0 pyh44b312d_0 conda-forge
bokeh 2.2.3 py36h79c6626_0 conda-forge
boost-cpp 1.70.0 hef959ae_3 conda-forge
bowtie2 2.4.2 py36h0c56d2d_1 bioconda
brotlipy 0.7.0 py36h20b66c6_1001 conda-forge
bwidget 1.9.14 h694c41f_0 conda-forge
bzip2 1.0.8 hc929b4f_4 conda-forge
c-ares 1.17.1 h0d85af4_1 conda-forge
ca-certificates 2020.12.5 h033912b_0 conda-forge
cachecontrol 0.12.6 py_0 conda-forge
cached-property 1.5.1 py_0 conda-forge
cairo 1.16.0 he8db5a5_1006 conda-forge
cctools_osx-64 949.0.1 h2f0f38f_19 conda-forge
certifi 2020.12.5 py36h79c6626_1 conda-forge
cffi 1.14.5 py36hfaecaff_0 conda-forge
chardet 4.0.0 py36h79c6626_1 conda-forge
clang 11.0.1 h694c41f_1 conda-forge
clang-11 11.0.1 default_hf8bb9ca_1 conda-forge
clang_osx-64 11.0.1 hb91bd55_2 conda-forge
clangxx 11.0.1 default_hf8bb9ca_1 conda-forge
clangxx_osx-64 11.0.1 h7e1b574_2 conda-forge
click 7.1.2 pyh9f0ad1d_0 conda-forge
compiler-rt 11.0.1 h654b07c_0 conda-forge
compiler-rt_osx-64 11.0.1 h8c5fa43_0 conda-forge
cryptography 3.4.4 py36h0ecfcee_0 conda-forge
curl 7.71.1 hcb81553_8 conda-forge
cutadapt 3.2 py36he651532_0 bioconda
cycler 0.10.0 py_2 conda-forge
cython 0.29.22 py36hb100763_0 conda-forge
dataclasses 0.7 pyhe4b4509_6 conda-forge
deblur 1.1.0 py_2 bioconda
decorator 4.4.2 py_0 conda-forge
defusedxml 0.6.0 py_0 conda-forge
dendropy 4.5.2 pyh3252c3a_0 bioconda
dnaio 0.5.0 py36he651532_0 bioconda
emperor 1.0.1 py36h79c6626_1 conda-forge
entrez-direct 13.9 pl526h375a9b1_1 bioconda
entrypoints 0.3 pyhd8ed1ab_1003 conda-forge
expat 2.2.10 h1c7c35f_0 conda-forge
fastcluster 1.1.26 py36h72eec15_2 conda-forge
fasttree 2.1.10 0 bioconda
fontconfig 2.13.1 hd23ceaa_1004 conda-forge
freetype 2.10.4 h4cff582_1 conda-forge
fribidi 1.0.10 hbcb3906_0 conda-forge
future 0.18.2 py36h79c6626_3 conda-forge
gettext 0.19.8.1 h7937167_1005 conda-forge
gfortran_impl_osx-64 9.3.0 h9cc0e5e_19 conda-forge
gfortran_osx-64 9.3.0 h18f7dce_14 conda-forge
glib 2.66.7 he49afe7_1 conda-forge
glib-tools 2.66.7 he49afe7_1 conda-forge
gmp 6.2.1 h2e338ed_0 conda-forge
gneiss 0.4.6 py_0 bioconda
graphite2 1.3.13 h2e338ed_1001 conda-forge
gsl 2.6 h71c5fe9_2 conda-forge
h5py 3.1.0 nompi_py36h9252a2b_100 conda-forge
harfbuzz 2.7.2 h73e2de6_1 conda-forge
hdf5 1.10.6 nompi_hc5d9132_1114 conda-forge
hdmedians 0.14.1 py36h809c706_1 conda-forge
hmmer 3.1b2 3 bioconda
htslib 1.11 h422799e_2 bioconda
icu 67.1 hb1e8313_0 conda-forge
idna 2.10 pyh9f0ad1d_0 conda-forge
ijson 3.1.3 pyhd3deb0d_0 conda-forge
importlib-metadata 3.4.0 py36h79c6626_0 conda-forge
importlib_metadata 3.4.0 hd8ed1ab_0 conda-forge
iniconfig 1.1.1 pyh9f0ad1d_0 conda-forge
ipykernel 5.5.0 py36h9cf137f_1 conda-forge
ipython 7.16.1 py36h9cf137f_2 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
ipywidgets 7.6.3 pyhd3deb0d_0 conda-forge
iqtree 2.0.3 h7eed37d_1 bioconda
isa-l 2.30.0 h0d85af4_4 conda-forge
isl 0.22.1 hb1e8313_2 conda-forge
jedi 0.17.2 py36h79c6626_1 conda-forge
jinja2 2.11.3 pyh44b312d_0 conda-forge
joblib 1.0.1 pyhd8ed1ab_0 conda-forge
jpeg 9d hbcb3906_0 conda-forge
jsonschema 3.2.0 pyhd8ed1ab_3 conda-forge
jupyter_client 6.1.11 pyhd8ed1ab_1 conda-forge
jupyter_core 4.7.1 py36h79c6626_0 conda-forge
jupyterlab_pygments 0.1.2 pyh9f0ad1d_0 conda-forge
jupyterlab_widgets 1.0.0 pyhd8ed1ab_1 conda-forge
kiwisolver 1.3.1 py36h615c93b_1 conda-forge
krb5 1.17.2 h60d9502_0 conda-forge
lcms2 2.12 h577c468_0 conda-forge
ld64_osx-64 530 hea264c1_19 conda-forge
ldid 2.1.2 h7660a38_2 conda-forge
libarbdb 6.0.6 h82bc0eb_8 bioconda
libblas 3.9.0 8_openblas conda-forge
libcblas 3.9.0 8_openblas conda-forge
libclang-cpp11 11.0.1 default_hf8bb9ca_1 conda-forge
libcurl 7.71.1 h9bf37e3_8 conda-forge
libcxx 11.0.1 habf9029_0 conda-forge
libdeflate 1.7 h35c211d_5 conda-forge
libedit 3.1.20191231 h0678c8f_2 conda-forge
libev 4.33 haf1e3a3_1 conda-forge
libffi 3.3 h046ec9c_2 conda-forge
libgcc 4.8.5 1 conda-forge
libgfortran 5.0.0 9_3_0_h6c81a4c_20 conda-forge
libgfortran-devel_osx-64 9.3.0 h6c81a4c_20 conda-forge
libgfortran5 9.3.0 h6c81a4c_20 conda-forge
libglib 2.66.7 hd556434_1 conda-forge
libiconv 1.16 haf1e3a3_0 conda-forge
liblapack 3.9.0 8_openblas conda-forge
liblapacke 3.9.0 8_openblas conda-forge
libllvm11 11.0.1 h223d4b2_0 conda-forge
libnghttp2 1.43.0 h07e645a_0 conda-forge
libopenblas 0.3.12 openmp_h54245bb_1 conda-forge
libpng 1.6.37 h7cec526_2 conda-forge
libsodium 1.0.18 hbcb3906_1 conda-forge
libssh2 1.9.0 h52ee1ee_6 conda-forge
libtiff 4.2.0 h355d032_0 conda-forge
libwebp-base 1.2.0 h0d85af4_2 conda-forge
libxml2 2.9.10 h2c6e4a5_2 conda-forge
llvm-openmp 11.0.1 h7c73e74_0 conda-forge
llvm-tools 11.0.1 h223d4b2_0 conda-forge
lockfile 0.12.2 py_1 conda-forge
lz4 3.1.3 py36h8314f8a_0 conda-forge
lz4-c 1.9.3 h046ec9c_0 conda-forge
mafft 7.475 h0b31af3_0 bioconda
make 4.3 h22f3db7_1 conda-forge
markupsafe 1.1.1 py36h20b66c6_3 conda-forge
matplotlib 3.2.2 1 conda-forge
matplotlib-base 3.2.2 py36h83d3ec1_1 conda-forge
mistune 0.8.4 py36h20b66c6_1003 conda-forge
more-itertools 8.7.0 pyhd8ed1ab_0 conda-forge
mpc 1.1.0 ha57cd0f_1009 conda-forge
mpfr 4.0.2 h72d8aaf_1 conda-forge
msgpack-python 1.0.2 py36h615c93b_1 conda-forge
natsort 7.1.1 pyhd8ed1ab_0 conda-forge
nbclient 0.5.2 pyhd8ed1ab_0 conda-forge
nbconvert 6.0.7 py36h79c6626_3 conda-forge
nbformat 5.1.2 pyhd8ed1ab_1 conda-forge
ncurses 6.2 h2e338ed_4 conda-forge
nest-asyncio 1.4.3 pyhd8ed1ab_0 conda-forge
networkx 2.5 py_0 conda-forge
nose 1.3.7 py_1006 conda-forge
notebook 6.2.0 py36h79c6626_0 conda-forge
numpy 1.19.5 py36h08dc641_1 conda-forge
olefile 0.46 pyh9f0ad1d_1 conda-forge
openblas 0.3.12 openmp_hd4b4ca2_1 conda-forge
openjdk 11.0.8 hb0a8c7a_0 conda-forge
openssl 1.1.1j hbcf498f_0 conda-forge
packaging 20.9 pyh44b312d_0 conda-forge
pandas 1.1.5 py36h2be6da3_0 conda-forge
pandoc 2.11.4 h35c211d_0 conda-forge
pandocfilters 1.4.2 py_1 conda-forge
pango 1.42.4 ha86e081_5 conda-forge
parso 0.7.1 pyh9f0ad1d_0 conda-forge
patsy 0.5.1 py_0 conda-forge
pcre 8.44 hb1e8313_0 conda-forge
pcre2 10.36 h5cf9962_1 conda-forge
perl 5.26.2 hbcb3906_1008 conda-forge
perl-archive-tar 2.32 pl526_0 bioconda
perl-base 2.23 pl526_1 bioconda
perl-business-isbn 3.004 pl526_0 bioconda
perl-business-isbn-data 20140910.003 pl526_0 bioconda
perl-carp 1.38 pl526_3 bioconda
perl-common-sense 3.74 pl526_2 bioconda
perl-compress-raw-bzip2 2.087 pl526h6de7cb9_0 bioconda
perl-compress-raw-zlib 2.087 pl526h770b8ee_0 bioconda
perl-constant 1.33 pl526_1 bioconda
perl-data-dumper 2.173 pl526_0 bioconda
perl-digest-hmac 1.03 pl526_3 bioconda
perl-digest-md5 2.55 pl526_0 bioconda
perl-encode 2.88 pl526_1 bioconda
perl-encode-locale 1.05 pl526_6 bioconda
perl-exporter 5.72 pl526_1 bioconda
perl-exporter-tiny 1.002001 pl526_0 bioconda
perl-extutils-makemaker 7.36 pl526_1 bioconda
perl-file-listing 6.04 pl526_1 bioconda
perl-html-parser 3.72 pl526h04f5b5a_5 bioconda
perl-html-tagset 3.20 pl526_3 bioconda
perl-html-tree 5.07 pl526_1 bioconda
perl-http-cookies 6.04 pl526_0 bioconda
perl-http-daemon 6.01 pl526_1 bioconda
perl-http-date 6.02 pl526_3 bioconda
perl-http-message 6.18 pl526_0 bioconda
perl-http-negotiate 6.01 pl526_3 bioconda
perl-io-compress 2.087 pl526h6de7cb9_0 bioconda
perl-io-html 1.001 pl526_2 bioconda
perl-io-socket-ssl 2.066 pl526_0 bioconda
perl-io-zlib 1.10 pl526_2 bioconda
perl-json 4.02 pl526_0 bioconda
perl-json-xs 2.34 pl526h04f5b5a_3 bioconda
perl-libwww-perl 6.39 pl526_0 bioconda
perl-list-moreutils 0.428 pl526_1 bioconda
perl-list-moreutils-xs 0.428 pl526_0 bioconda
perl-lwp-mediatypes 6.04 pl526_0 bioconda
perl-lwp-protocol-https 6.07 pl526_4 bioconda
perl-mime-base64 3.15 pl526_1 bioconda
perl-mozilla-ca 20180117 pl526_1 bioconda
perl-net-http 6.19 pl526_0 bioconda
perl-net-ssleay 1.88 pl526hb1dc21d_0 bioconda
perl-ntlm 1.09 pl526_4 bioconda
perl-parent 0.236 pl526_1 bioconda
perl-pathtools 3.75 pl526h1de35cc_1 bioconda
perl-scalar-list-utils 1.52 pl526h01d97ff_0 bioconda
perl-socket 2.027 pl526_1 bioconda
perl-storable 3.15 pl526h1de35cc_0 bioconda
perl-test-requiresinternet 0.05 pl526_0 bioconda
perl-time-local 1.28 pl526_1 bioconda
perl-try-tiny 0.30 pl526_1 bioconda
perl-types-serialiser 1.0 pl526_2 bioconda
perl-uri 1.76 pl526_0 bioconda
perl-www-robotrules 6.02 pl526_3 bioconda
perl-xml-namespacesupport 1.12 pl526_0 bioconda
perl-xml-parser 2.44_01 pl526hb1d6bea_1002 conda-forge
perl-xml-sax 0.99 pl526_1 bioconda
perl-xml-sax-base 1.09 pl526_0 bioconda
perl-xml-sax-expat 0.51 pl526_3 bioconda
perl-xml-simple 2.25 pl526_1 bioconda
perl-xsloader 0.24 pl526_0 bioconda
pexpect 4.8.0 pyh9f0ad1d_2 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pigz 2.5 haaf19a9_0 conda-forge
pillow 8.1.0 py36h0332b30_2 conda-forge
pip 21.0.1 pyhd8ed1ab_0 conda-forge
pixman 0.40.0 hbcb3906_0 conda-forge
pluggy 0.13.1 py36h79c6626_4 conda-forge
prometheus_client 0.9.0 pyhd3deb0d_0 conda-forge
prompt-toolkit 3.0.16 pyha770c72_0 conda-forge
psutil 5.8.0 py36h20b66c6_1 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
py 1.10.0 pyhd3deb0d_0 conda-forge
pycparser 2.20 pyh9f0ad1d_2 conda-forge
pygments 2.8.0 pyhd8ed1ab_0 conda-forge
pyopenssl 20.0.1 pyhd8ed1ab_0 conda-forge
pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge
pyrsistent 0.17.3 py36h20b66c6_2 conda-forge
pysocks 1.7.1 py36h79c6626_3 conda-forge
pytest 6.2.2 py36h79c6626_0 conda-forge
python 3.6.13 h7728216_0_cpython conda-forge
python-dateutil 2.8.1 py_0 conda-forge
python-isal 0.5.0 py36h49ba835_0 conda-forge
python_abi 3.6 1_cp36m conda-forge
pytz 2021.1 pyhd8ed1ab_0 conda-forge
pyyaml 5.4.1 py36h20b66c6_0 conda-forge
pyzmq 22.0.3 py36h50cd92c_1 conda-forge
q2-alignment 2021.2.0 py36_0 qiime2/label/r2021.2
q2-composition 2021.2.0 py36_0 qiime2/label/r2021.2
q2-cutadapt 2021.2.0 py36_0 qiime2/label/r2021.2
q2-dada2 2021.2.0 py36_0 qiime2/label/r2021.2
q2-deblur 2021.2.0 py36_0 qiime2/label/r2021.2
q2-demux 2021.2.0 py36_0 qiime2/label/r2021.2
q2-diversity 2021.2.0 py36_0 qiime2/label/r2021.2
q2-diversity-lib 2021.2.0 0 qiime2/label/r2021.2
q2-emperor 2021.2.0 py36_0 qiime2/label/r2021.2
q2-feature-classifier 2021.2.0 py36_0 qiime2/label/r2021.2
q2-feature-table 2021.2.0 py36_0 qiime2/label/r2021.2
q2-fragment-insertion 2021.2.0 py36_0 qiime2/label/r2021.2
q2-gneiss 2021.2.0 py36_0 qiime2/label/r2021.2
q2-longitudinal 2021.2.0 py36_0 qiime2/label/r2021.2
q2-metadata 2021.2.0 py36_0 qiime2/label/r2021.2
q2-phylogeny 2021.2.0 py36_0 qiime2/label/r2021.2
q2-quality-control 2021.2.0 py36_0 qiime2/label/r2021.2
q2-quality-filter 2021.2.0 py36_0 qiime2/label/r2021.2
q2-sample-classifier 2021.2.0 py36_0 qiime2/label/r2021.2
q2-taxa 2021.2.0 py36_0 qiime2/label/r2021.2
q2-types 2021.2.0 py36_0 qiime2/label/r2021.2
q2-vsearch 2021.2.0 py36_0 qiime2/label/r2021.2
q2cli 2021.2.0 py36_0 qiime2/label/r2021.2
q2templates 2021.2.0 py36_0 qiime2/label/r2021.2
qiime2 2021.2.0 py36_0 qiime2/label/r2021.2
r-assertthat 0.2.1 r40h6115d3f_2 conda-forge
r-backports 1.2.1 r40h066c5db_0 conda-forge
r-base 4.0.3 hc5aadab_3 conda-forge
r-bh 1.75.0_0 r40hc72bb7e_0 conda-forge
r-bitops 1.0_6 r40h17f1fa6_1004 conda-forge
r-brio 1.1.1 r40h066c5db_0 conda-forge
r-callr 3.5.1 r40h142f84f_0 conda-forge
r-cli 2.3.1 r40hc72bb7e_0 conda-forge
r-cluster 2.1.1 r40h59bb11e_0 conda-forge
r-colorspace 2.0_0 r40h6b199c2_0 conda-forge
r-crayon 1.4.1 r40hc72bb7e_0 conda-forge
r-desc 1.2.0 r40h6115d3f_1003 conda-forge
r-diffobj 0.3.3 r40h066c5db_0 conda-forge
r-digest 0.6.27 r40h342fd00_0 conda-forge
r-ellipsis 0.3.1 r40h17f1fa6_0 conda-forge
r-evaluate 0.14 r40h6115d3f_2 conda-forge
r-fansi 0.4.2 r40h066c5db_0 conda-forge
r-farver 2.0.3 r40hc5da6b9_1 conda-forge
r-formatr 1.7 r40h6115d3f_2 conda-forge
r-futile.logger 1.4.3 r40h6115d3f_1003 conda-forge
r-futile.options 1.0.1 r40h6115d3f_1002 conda-forge
r-ggplot2 3.3.3 r40hc72bb7e_0 conda-forge
r-glue 1.4.2 r40h066c5db_0 conda-forge
r-gtable 0.3.0 r40h6115d3f_3 conda-forge
r-hwriter 1.3.2 r40h6115d3f_1003 conda-forge
r-isoband 0.2.3 r40h1019320_0 conda-forge
r-jpeg 0.1_8.1 r40h17f1fa6_1 conda-forge
r-jsonlite 1.7.2 r40h066c5db_0 conda-forge
r-labeling 0.4.2 r40h142f84f_0 conda-forge
r-lambda.r 1.2.4 r40h6115d3f_1 conda-forge
r-lattice 0.20_41 r40h066c5db_3 conda-forge
r-latticeextra 0.6_29 r40h6115d3f_1 conda-forge
r-lifecycle 1.0.0 r40hc72bb7e_0 conda-forge
r-magrittr 2.0.1 r40h066c5db_1 conda-forge
r-mass 7.3_53.1 r40hf6ff476_0 conda-forge
r-matrix 1.3_2 r40h9a4b173_0 conda-forge
r-matrixstats 0.58.0 r40hf6ff476_0 conda-forge
r-mgcv 1.8_34 r40h9a4b173_0 conda-forge
r-munsell 0.5.0 r40h6115d3f_1003 conda-forge
r-nlme 3.1_152 r40h59bb11e_0 conda-forge
r-permute 0.9_5 r40h6115d3f_3 conda-forge
r-pillar 1.5.0 r40hc72bb7e_0 conda-forge
r-pkgbuild 1.2.0 r40hc72bb7e_0 conda-forge
r-pkgconfig 2.0.3 r40h6115d3f_1 conda-forge
r-pkgload 1.2.0 r40h4efb63e_0 conda-forge
r-plyr 1.8.6 r40hc5da6b9_1 conda-forge
r-png 0.1_7 r40h17f1fa6_1004 conda-forge
r-praise 1.0.0 r40h6115d3f_1004 conda-forge
r-prettyunits 1.1.1 r40h6115d3f_1 conda-forge
r-processx 3.4.5 r40he27d7ee_0 conda-forge
r-ps 1.5.0 r40h066c5db_0 conda-forge
r-r6 2.5.0 r40hc72bb7e_0 conda-forge
r-rcolorbrewer 1.1_2 r40h6115d3f_1003 conda-forge
r-rcpp 1.0.6 r40h815b84a_0 conda-forge
r-rcppparallel 5.0.2 r40hc5da6b9_0 conda-forge
r-rcurl 1.98_1.2 r40h17f1fa6_1 conda-forge
r-rematch2 2.1.2 r40h6115d3f_1 conda-forge
r-reshape2 1.4.4 r40hc5da6b9_1 conda-forge
r-rlang 0.4.10 r40h066c5db_0 conda-forge
r-rprojroot 2.0.2 r40hc72bb7e_0 conda-forge
r-rstudioapi 0.13 r40hc72bb7e_0 conda-forge
r-scales 1.1.1 r40h6115d3f_0 conda-forge
r-snow 0.4_3 r40h6115d3f_1002 conda-forge
r-stringi 1.5.3 r40hdb83bab_0 conda-forge
r-stringr 1.4.0 r40h6115d3f_2 conda-forge
r-testthat 3.0.2 r40h4efb63e_0 conda-forge
r-tibble 3.0.6 r40hf6ff476_0 conda-forge
r-utf8 1.1.4 r40h17f1fa6_1003 conda-forge
r-vctrs 0.3.6 r40h066c5db_0 conda-forge
r-vegan 2.5_7 r40h0a2d2ed_0 conda-forge
r-viridislite 0.3.0 r40h6115d3f_1003 conda-forge
r-waldo 0.2.4 r40hc72bb7e_0 conda-forge
r-withr 2.4.1 r40hc72bb7e_0 conda-forge
r-zeallot 0.1.0 r40h6115d3f_1002 conda-forge
raxml 8.2.12 h0b31af3_2 bioconda
readline 8.0 h0678c8f_2 conda-forge
requests 2.25.1 pyhd3deb0d_0 conda-forge
samtools 1.11 h725deca_0 bioconda
scikit-bio 0.5.6 py36h642477c_4 conda-forge
scikit-learn 0.23.1 py36hef903b7_0 conda-forge
scipy 1.5.3 py36h04de62b_0 conda-forge
seaborn 0.11.1 hd8ed1ab_1 conda-forge
seaborn-base 0.11.1 pyhd8ed1ab_1 conda-forge
send2trash 1.5.0 py_0 conda-forge
sepp 4.3.10 py36heb1dbbb_2 bioconda
setuptools 49.6.0 py36h79c6626_3 conda-forge
sina 1.7.2 hadaa689_0 bioconda
six 1.15.0 pyh9f0ad1d_0 conda-forge
sortmerna 2.0 h5c9b4e4_4 bioconda
sqlite 3.34.0 h17101e1_0 conda-forge
statsmodels 0.12.2 py36hf14bfbd_0 conda-forge
tapi 1100.0.11 h9ce4665_0 conda-forge
tbb 2020.2 h940c156_4 conda-forge
terminado 0.9.2 py36h79c6626_0 conda-forge
testpath 0.4.4 py_0 conda-forge
threadpoolctl 2.1.0 pyh5ca1d4c_0 conda-forge
tk 8.6.10 h0419947_1 conda-forge
tktable 2.10 h49f0cf7_3 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tornado 6.1 py36h20b66c6_1 conda-forge
traitlets 4.3.3 py36h9f0ad1d_1 conda-forge
typing_extensions 3.7.4.3 py_0 conda-forge
tzlocal 2.1 pyh9f0ad1d_0 conda-forge
unifrac 0.20.2 py36h098b9da_0 bioconda
urllib3 1.26.3 pyhd8ed1ab_0 conda-forge
vsearch 2.7.0 1 bioconda
wcwidth 0.2.5 pyh9f0ad1d_2 conda-forge
webencodings 0.5.1 py_1 conda-forge
wheel 0.36.2 pyhd3deb0d_0 conda-forge
widgetsnbextension 3.5.1 py36h79c6626_4 conda-forge
xopen 1.1.0 py36h79c6626_1 conda-forge
xz 5.2.5 haf1e3a3_1 conda-forge
yaml 0.2.5 haf1e3a3_0 conda-forge
zeromq 4.3.4 h1c7c35f_0 conda-forge
zipp 3.4.0 py_0 conda-forge
zlib 1.2.11 h7795811_1010 conda-forge
zstd 1.4.8 hf387650_1 conda-forge
Yes after creating my qiime2-2021.2 env, I activate the env with conda activate qiime2-2021.2
Then I set my wd, and I run my analysis command:
qiime feature-classifier classify-sklearn --i-reads feature-data-sequence.qza --i-classifier silva-138-99-seqs-515-806-nb-classifier.qza --o-classification taxonomy.qza
Btw, it sometimes gives me a new error, the same as mentioned already in other topics such as : https://forum.qiime2.org/t/invalid-value-for-i-classifier-invalid-value-for-i-reads/10093?u=elifkardas
Do you think all these bugs are related to a prob of memory ? I copy here the output of
df -ha
Filesystem Size Used Avail Capacity iused ifree %iused Mounted on
/dev/disk1s5s1 233Gi 14Gi 71Gi 17% 568975 2447532345 0% /
devfs 197Ki 197Ki 0Bi 100% 680 0 100% /dev
/dev/disk1s4 233Gi 2.0Gi 71Gi 3% 2 2448101318 0% /System/Volumes/VM
/dev/disk1s2 233Gi 413Mi 71Gi 1% 1408 2448099912 0% /System/Volumes/Preboot
/dev/disk1s6 233Gi 2.3Mi 71Gi 1% 16 2448101304 0% /System/Volumes/Update
/dev/disk1s1 233Gi 145Gi 71Gi 68% 1479296 2446622024 0% /System/Volumes/Data
map auto_home 0Bi 0Bi 0Bi 100% 0 0 100% /System/Volumes/Data/home
/dev/disk3s2 931Gi 167Gi 679Gi 20% 1041219 9764536221 0% /Volumes/LaCie
com.apple.TimeMachine.2020-12-26-170816.backup@/dev/disk3s2 931Gi 166Gi 679Gi 20% 1041180 9764536260 0% /Volumes/.timemachine/46759459-3004-4437-9B7E-60183154311A/2020-12-26-170816.backup
/dev/disk1s7 233Gi 832Ki 71Gi 1% 92 2448101228 0% /Volumes/macOS Beta
/dev/disk3s1 931Gi 85Gi 679Gi 12% 950253 9764627187 0% /Volumes/Sauvegardes de MacBook Pro de Elif
com.apple.TimeMachine.2021-03-19-130444.local@/dev/disk1s7 233Gi 820Ki 71Gi 1% 92 2448101228 0% /Volumes/com.apple.TimeMachine.localsnapshots/Backups.backupdb/MacBook Pro de Elif/2021-03-19-130444/macOS Beta
com.apple.TimeMachine.2021-03-19-130444.local@/dev/disk1s1 233Gi 143Gi 71Gi 67% 1582340 2446518980 0% /Volumes/com.apple.TimeMachine.localsnapshots/Backups.backupdb/MacBook Pro de Elif/2021-03-19-130444/Macintosh HD - Données