Hi, I am running following command and i am meeting error, qiime feature-table filter-samples --i-table table.qza --m-metadata-file Meta.tsv --p-where "BodySite='gut'" --o-filtered-table gut-table.qza If i run the command without --p-where i can get the results, I just wanted to ask here that my …

Hi @Kpatel , Just to get the full context, are you following the moving pictures tutorial, but working with your own data? If that's the case and you don't have a column called BodySite containing data labeled gut, the --p-where flag isn't going to work for you on your own data. (If you get to need…

Hi @jwdebelius , You are right i was following tutorial with my data and my body site in metadata was distal and proximal colon which is basically gut not written in that form, so i changed metadata and i was able to proceed for differential abundance analysis. That was a silly mistake indeed. Than…

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