Dear Qiime2 forum communities.
I got stuck in the Alpha and beta diversity analysis.
I ran the below:
qiime diversity core-metrics-phylogenetic
--p-sampling-depth 12386 \
After that, I got an error
--m-metadata-file sample-metadata.tsv \
--m-metadata-file: command not found
I confirmed my metadata file in the same working path and the file was validated using Keemei. My Qiime2 version is a 2022.8.
I also checked "--m-metadata-file" is listed in the parameter of qiime diversity core-metrics-phylogenetic \
I would like to ask you for troubleshooting. Your assistance is highly appreciated.