|
High sequences merged but low non-chimera sequences
|
|
4
|
26
|
December 31, 2024
|
|
nanopore sequences, some problems with
|
|
2
|
42
|
December 28, 2024
|
|
How to generate a differential abundance graph in QIIME2 with taxon as label instead of Feature ID
|
|
2
|
42
|
December 28, 2024
|
|
DADA2 error for 18S paired end reads
|
|
4
|
35
|
December 28, 2024
|
|
Generate ASV table for nanopore data
|
|
5
|
117
|
December 28, 2024
|
|
Several questions about qiime dada2 denoise-paired (about 700 words)
|
|
2
|
49
|
December 28, 2024
|
|
I want to import known sequences from a database to compare to qiime2 features
|
|
2
|
23
|
December 27, 2024
|
|
Merge metadata from BMR genomics
|
|
2
|
24
|
December 24, 2024
|
|
Not getting anything from the .qzv file
|
|
4
|
24
|
December 23, 2024
|
|
Sanity check on the rarefaction curve
|
|
7
|
46
|
December 22, 2024
|
|
RFE scores and accuracy do not match
|
|
3
|
30
|
December 22, 2024
|
|
Import fasta files without quality
|
|
10
|
121
|
December 22, 2024
|
|
Comparing amplicon studies that use different primers
|
|
9
|
115
|
December 22, 2024
|
|
Long Run Time for Qiime DADA2 Paired-End Denoising
|
|
4
|
40
|
December 22, 2024
|
|
Optimize DADA2 setup for Nanopore reads
|
|
2
|
275
|
December 22, 2024
|
|
SILVA reference metadata
|
|
5
|
37
|
December 20, 2024
|
|
Trimming 5bp in QIIME2 2024.5 Amplicon
|
|
4
|
25
|
December 16, 2024
|
|
Convert qza output files to qzv ?
|
|
4
|
48
|
December 13, 2024
|
|
454 data - Error rates could not be estimated
|
|
2
|
18
|
December 13, 2024
|
|
analysing trimmed data
|
|
18
|
87
|
December 13, 2024
|
|
DADA2: Low non-chimeric input after denoising
|
|
8
|
93
|
December 12, 2024
|
|
How to interpret quality scores?
|
|
3
|
109
|
December 8, 2024
|
|
How to merge rep-seqs in qiime ?
|
|
2
|
43
|
December 8, 2024
|
|
Is it normal for a column filtered by q-value in ANCOMBC have all the same number? How does ANCOMBC deals with NA values?
|
|
2
|
51
|
December 6, 2024
|
|
Same ASV comes up as a different taxonomy when doing BLAST in comparison to running feature-classifier using SILVA database
|
|
2
|
49
|
December 4, 2024
|
|
ANCOM-BC q values intergroup or intragroup
|
|
4
|
85
|
December 3, 2024
|
|
How to read exported ordination.txt file for PCOA?
|
|
4
|
48
|
December 3, 2024
|
|
Primers removal and if DADA2 is able to remove them
|
|
2
|
51
|
December 2, 2024
|
|
upload data for qiime
|
|
2
|
20
|
December 2, 2024
|
|
demux for fastq files that don't have barcode in them?
|
|
4
|
25
|
November 30, 2024
|
