General Discussion


Topic Replies Activity
Got reads from samples that were NOT in the flowcell 6 May 7, 2019
How to identify low biomass samples? 2 April 4, 2019
Suggestions for dada2 trunc parameters 5 May 3, 2019
Singletons to calculate alpha-diversity metrics like Shannon/Simpson 2 April 2, 2019
Method comparison - differences in observed richness 4 April 1, 2019
Trimming 2 samples 3 April 30, 2019
Features to Taxonomy labels, Dada2 Max Error Rate 12 March 28, 2019
What can I do with forward and reverse file [Software developer no bio-background] 3 March 26, 2019
Dude with qiime taxa barplot 5 March 26, 2019
Dada2 parameter 4 April 26, 2019
Alpha-diversity after filtering 7 March 25, 2019
Uchime ref questions 1 March 21, 2019
Mitochodrial 16S for mycobiome analysis 1 March 22, 2019
Making sense of diversity estimates 8 March 23, 2019
Gneiss Differential Abundance Test Questions 3 March 21, 2019
Dada2 chimera filtering and beyond 9 March 19, 2019
Filter by group or entire dataset? 7 March 15, 2019
QIIME compatible taxonomic databases help 6 April 15, 2019
Do the EMP 18S rRNA primers amplify bacteria as well? 4 March 12, 2019
SILVA: why is chloroplast defined as bacteria? 7 March 11, 2019
Using trimmomatic before qiime2 2 March 8, 2019
QIIME 1 and 2 returning completely different outputs 5 March 8, 2019
Parameters Description 2 March 8, 2019
Parameters are done In Order? 4 March 6, 2019
DADA2 parameters, Data Quality is so poor 3 April 6, 2019
Merging paired-end reads 2 March 5, 2019
After using DADA2, needs to take OTUs? 6 March 4, 2019
QIIME2 resource for developer 2 March 4, 2019
Low quality forward reads 8 March 3, 2019
What you Trimmomatic or quality control methods of qiime2? 3 March 1, 2019