General Discussion


Topic Replies Activity
Number of samples and Frequency per samples Vs. Number of Features and Frequencies per Features 9 March 31, 2019
Handling ambiguous nucleotides in database construction 7 February 26, 2019
No understand the these parameters' concept 8 February 26, 2019
Taxonomy assignment and rarefying 3 February 25, 2019
How can i pull individual bacterial sequences from 16s processed data 9 February 22, 2019
Filtering samples from sequencing run before running DADA2 5 February 16, 2019
Distance Matrix and features 2 February 15, 2019
Identifying bacterial taxa (16S) that correlate with eukaryotic taxa (18S) 8 February 15, 2019
Taxonomic drivers 5 February 14, 2019
Filter representative FASTA sequences 4 February 13, 2019
Using read counts for abundance analysis 8 February 11, 2019
Why does Greengenes assign more features at the class and order ranks than Silva? 1 February 8, 2019
Minimum read for denoising process 5 February 7, 2019
Working on functional gene- providing a database 2 February 7, 2019
I'm loosing too many OTUs with taxa filter-table (~80%)--is this a normal/common phenomenon? 9 February 5, 2019
Viewing reads before denoising 2 February 4, 2019
Question about analyzing many samples 3 February 2, 2019
Interpreting PC in beta-diversity 3 January 31, 2019
Best approach for analyzing Sanger sequences from ITS2 region 11 January 29, 2019
Comparing beta diversity between samples (not groups) 6 January 26, 2019
Approaches to functional profile assessment 3 January 18, 2019
Discussion: methods for removing contaminants and cross-talk 20 January 17, 2019
16s circular phylogenetic tree 2 January 16, 2019
Effect of not preparing data before DADA2 9 January 15, 2019
Any upcoming workshops? 3 January 14, 2019
Taxonomy Analysis questions 9 January 11, 2019
Potential artifacts produced with DADA2 wrapped in qiime2-2018.8 - need advice 7 January 7, 2019
Taxonomic completenes, missingness in BOLD COI database 2 January 4, 2019
What is the definition of sequence variants? 1 December 28, 2018
Qiime moving picture data 2 December 31, 2018