General Discussion


Topic Replies Activity
Unusual taxa in analysis 3 August 11, 2019
A few general question about qiime2 12 July 10, 2019
Comparing samples 7 August 9, 2019
Filter-out Chloroplast and mitochondria 4 July 9, 2019
alpha rarefaction -sampling depth 3 July 5, 2019
quality score and where to truncate sequence in DADA2? 3 July 3, 2019
Import Greengenes database 2 August 3, 2019
dada2 parameter to remove primer sequences and low quality bases 3 August 3, 2019
normalization in QIIME2 2 June 28, 2019
Simpson's index in qiime2 3 June 28, 2019
Normalization for microbiome 16s sequence analysis 10 June 27, 2019
benchmarking single/paired/join prior to denoising 4 June 26, 2019
Understanding beta-group-significance permanova pairwise statistics 4 July 28, 2019
pseudo-F ratio in PERMANOVA test 3 June 26, 2019
Different unassigned features name 5 June 25, 2019
ADONIS: correct interpretation of interaction among factors 3 July 22, 2019
Quick clarification on feature classifiers 3 June 18, 2019
comparing BaseSpace and qiime2 results 2 June 18, 2019
To cluster or not to cluster? 23 July 18, 2019
Why do the DADA2 default setting have such a low PHRED score? 10 June 14, 2019
To choose the best Beta-div comparison approach 3 June 11, 2019
Minding the gap 1 June 8, 2019
Which table (after denoiseing or clustering) is better to be used to create otu table? 3 June 7, 2019
Advice on Improving Skills 2 June 7, 2019
comparison of Illumina vs. PacBio amplicon sequencing vs. metagenome sequencing 2 June 5, 2019
what is the minimum acceptable number of reads post-denoising? 1 May 30, 2019
>90% of sequences are unidentified?!? WHY? 10 May 30, 2019
-P-trim and -p-trunc values selection for qiime dada2 denoise-paired 7 June 30, 2019
Any method for converting FASTA to taxonomy (txt) format for import to FeatureData[Taxonomy]? 3 May 30, 2019
Recommended Specifications to run QIIME2 7 May 27, 2019