General Discussion


Topic Replies Activity
About the General Discussion category 1 November 14, 2018
Differential abundance analysis and cage/pen effect 2 July 22, 2019
Wouldn't it be better to think of an ASV as a distinct 16S copy, rather than a distinct species? 2 July 22, 2019
trimming sequences prior to dada2 in the moving pictures tutorial 5 July 21, 2019
alpha and beta diversity interpretation 7 July 20, 2019
What does the NA represent in the legend? 5 July 19, 2019
Normalisation of features 5 July 19, 2019
taxa-bar-plot and rarefying 4 July 18, 2019
How to pick a sampling depth for alpha & beta diversity. 2 July 18, 2019
Usefulness of Presence-absence analysis? 9 July 18, 2019
classifier question 4 July 17, 2019
taxa-bar-plot visualization 5 July 16, 2019
ASV IDs in publication 5 July 12, 2019
Comparison of Similarity Between Two Different Datasets 2 July 11, 2019
Unusual taxa in analysis 2 July 11, 2019
A few general question about qiime2 12 July 10, 2019
Comparing samples 6 July 9, 2019
Filter-out Chloroplast and mitochondria 4 July 9, 2019
alpha rarefaction -sampling depth 3 July 5, 2019
quality score and where to truncate sequence in DADA2? 3 July 3, 2019
Import Greengenes database 1 July 3, 2019
dada2 parameter to remove primer sequences and low quality bases 2 July 2, 2019
normalization in QIIME2 2 June 28, 2019
Simpson's index in qiime2 3 June 28, 2019
Normalization for microbiome 16s sequence analysis 10 June 27, 2019
benchmarking single/paired/join prior to denoising 4 June 26, 2019
Understanding beta-group-significance permanova pairwise statistics 3 June 26, 2019
pseudo-F ratio in PERMANOVA test 3 June 26, 2019
Different unassigned features name 5 June 25, 2019
Phylogenetic distance and differences in microbiome 2 June 24, 2019