General Discussion


Topic Replies Created
About the General Discussion category 1 November 14, 2018
DADA2 vs. QIIME2 2 April 18, 2019
IDTAXA: : a novel approach for accurate taxonomic classification of microbiome sequences 3 April 18, 2019
Partially subsample or not? 5 April 15, 2019
MinION 16S data for diversity analysis? 7 April 11, 2019
Simulated data? 6 April 3, 2019
Why all taxonomic levels on BarPlot have 'D' letter? 1 April 15, 2019
DADA2 is the truncation parameter necessary to use? 2 April 15, 2019
Application of qiime2 in undergraduate education 4 December 15, 2018
Interpretation of the Results 1 April 11, 2019
ANCOM result volcano plot clr F-statistic calculation formula 2 April 8, 2019
When to collapse (the data, not yourself) 2 April 5, 2019
Got reads from samples that were NOT in the flowcell 5 April 2, 2019
How to identify low biomass samples? 2 April 4, 2019
Suggestions for dada2 trunc parameters 4 March 27, 2019
Singletons to calculate alpha-diversity metrics like Shannon/Simpson 2 April 2, 2019
Method comparison - differences in observed richness 4 March 15, 2019
Trimming 2 samples 2 March 28, 2019
Features to Taxonomy labels, Dada2 Max Error Rate 12 March 27, 2019
What can I do with forward and reverse file [Software developer no bio-background] 3 March 26, 2019
Dude with qiime taxa barplot 5 March 24, 2019
Dada2 parameter 3 March 26, 2019
Alpha-diversity after filtering 7 March 22, 2019
Uchime ref questions 1 March 21, 2019
Mitochodrial 16S for mycobiome analysis 1 March 22, 2019
Making sense of diversity estimates 8 March 21, 2019
Gneiss Differential Abundance Test Questions 3 March 20, 2019
Dada2 chimera filtering and beyond 9 March 7, 2019
Filter by group or entire dataset? 7 March 15, 2019
QIIME compatible taxonomic databases help 6 March 13, 2019