General Discussion


Topic Replies Activity
About the General Discussion category 1 November 14, 2018
How to program a Miseq run with EMP libraries 5 August 24, 2019
ASVs versus OTUs, is conversion possible 2 August 23, 2019
Greengenes or Silva for 16s 7 August 23, 2019
weighted unifrac differences 4 August 23, 2019
Time + treatement effects 16 August 23, 2019
What is the correct way to submit amplicon sequencing data to NCBI 3 August 22, 2019
Differential abundance analysis and cage/pen effect 13 August 21, 2019
Will qiime2 support functional gene analysis in the future? 10 August 21, 2019
Parameter choose when remove chimeras in DADA2 2 August 21, 2019
sequencing clustering 3 August 20, 2019
Adding variables with weird character to "gneiss ols-regression" model 1 August 18, 2019
Replicates management 5 August 14, 2019
Can we use extracted reference reads to calculate expected amplicon sizes? 6 August 13, 2019
How are these feature ids different? 2 August 13, 2019
comparison between chao1 and observed_otus by using otu clustering pipeline 9 August 13, 2019
97% similarity VS 99% Similarity-QIIME2 5 August 12, 2019
Phylogenetic distance and differences in microbiome 10 August 9, 2019
When to make the phylogenetic tree 2 August 6, 2019
Alpha rarefaction x axis 3 August 1, 2019
Using Qiime2 to run core diversity analysis on Humann2 outputs 2 July 24, 2019
Finding common species between two studies 5 August 25, 2019
alpha and beta diversity interpretation 11 August 24, 2019
Help! Too many taxa in mock community - how to interpret or how to deal with it? 2 July 23, 2019
Wouldn't it be better to think of an ASV as a distinct 16S copy, rather than a distinct species? 5 July 23, 2019
Alpha rarefaction: Interpretation of Results 4 August 23, 2019
trimming sequences prior to dada2 in the moving pictures tutorial 5 July 21, 2019
What does the NA represent in the legend? 5 July 19, 2019
Normalisation of features 6 August 19, 2019
taxa-bar-plot and rarefying 4 July 18, 2019