Community Contributions


Tutorials The Community Tutorials category is for sharing QIIME 2 tutorials that are not part of the official QIIME 2 documentation. These may be contributed by members of the QIIME 2 user community, or by plugin developers who are drafting new tutorials that may ultimately be included in the QIIME 2 documentation. Plugins The Community Plugins category is for sharing QIIME 2 plugins that are not part of the QIIME 2 Core Distribution. These may be contributed by members of the QIIME 2 plugin developer community, or by QIIME 2 developers who are not ready to transition their methods into the core distribution yet (e.g., because the methods and visualizers are experimental, or because the plugin or some of its dependencies are not conda installable). Data resources The Community Data Resources category is for sharing QIIME 2 resources, such as trained feature classifiers or reference databases, that are not listed on the QIIME 2 Data Resources page. These may be contributed by members of the QIIME 2 developer or user community, or by QIIME 2 developers who are not ready to include their resource on the QIIME 2 Data Resources page yet. Translations This category contains translations of the QIIME 2 documentation in different languages, developed and contributed by members of the QIIME 2 user community. The translated documentation should be considered supplemental to the primary documentation at https://docs.qiime2.org. If the translated documentation is popular, we may eventually work towards including it at https://docs.qiime2.org.
Topic Replies Activity
About the Community Contributions category 1 February 14, 2018
Differential abundance analysis with q2-aldex2 1 October 8, 2019
Robust Aitchison PCA Beta Diversity with DEICODE 8 October 4, 2019
QIIME2 on JupyterLab on CyVerse 4 September 30, 2019
Qiime2 compatible oceanic databases - PR2 and Phytoref 7 September 30, 2019
Fungal ITS analysis tutorial 9 September 30, 2019
Demultiplexing and Trimming Adapters from Reads with q2-cutadapt 8 September 28, 2019
Exporting and modifying BIOM tables (e.g. adding taxonomy annotations) 13 September 26, 2019
QIIME 2用户文档. 06沙漠土壤分析AtacamaSoil(2019.7) 1 September 10, 2019
QIIME 2用户文档. 05粪菌移植分析练习Fecal microbiota transplant (FMT)(2019.7) 1 August 31, 2019
Automatic Manifest Maker in R 6 September 4, 2019
QIIME2 snakemake workflow tutorial - 18S/16S tag-sequencing 1 August 30, 2019
SILVA 132 Classifiers 341f-806r region 7 August 29, 2019
QIIME 2用户文档. 04人体微生物组分析Moving Pictures(2019.7) 3 August 27, 2019
QIIME 2用户文档. 03老司机上路指南Experience(2019.7) 1 August 26, 2019
QIIME 2用户文档. 02插件工作流程概述Plugin Workflows Overview(2019.7) 1 August 26, 2019
QIIME 2用户文档. 01简介和安装 Introduction & Install(2019.7) 1 August 25, 2019
Q2-ITSxpress: A tutorial on a QIIME 2 plugin to trim ITS sequences 31 August 15, 2019
ANCOM: 'low W taxa identified as significant' issue's workaround, ANCOM2 code/instructions 6 August 13, 2019
UNITE (v.8.0 2018-11-18) Classifiers for QIIME2 Available Here 4 July 23, 2019
Q2-dsfdr: community tutorial 10 July 13, 2019
Automatic Manifest Maker in Python3 2 July 13, 2019
Available: Pre-trained classifier of V3-V4 (341F, 805R) region with gg_99 7 June 6, 2019
q2-phylogenize: a pipeline for associating microbial genes with environments, accounting for phylogeny 4 June 2, 2019
Running The Moving Pictures Tutorial In Docker (2018.11) 4 May 7, 2019
Tutorial: Integrating QIIME2 and R for data visualization and analysis using qiime2R 6 May 6, 2019
q2-SCNIC: A tool for making correlation networks, finding modules of observations and summarizing them 20 May 6, 2019
Get fully annotated `.biom` tables from Qiime 2 to Qiime 1 (and e.g. Phyloseq) 3 April 8, 2019
Q2-perc-norm community plugin 6 April 8, 2019
Q2-alignment: reference based alignment using SINA 2 March 25, 2019