Community Contributions


Plugins The Community Plugins category is for sharing QIIME 2 plugins that are not part of the <a href="https://docs.qiime2.org/2017.10/install/#qiime-2-core-2017-10-distribution">QIIME 2 Core Distribution</a>. These may be contributed by members of the QIIME 2 plugin developer community, or by QIIME 2 developers who are not ready to transition their methods into the core distribution yet (e.g., because the methods and visualizers are experimental, or because the plugin or some of its dependencies are not conda installable).
Data resources The Community Data Resources category is for sharing QIIME 2 resources, such as trained feature classifiers or reference databases, that are not listed on the <a href="https://docs.qiime2.org/2017.12/data-resources/">QIIME 2 Data Resources page</a>. These may be contributed by members of the QIIME 2 developer or user community, or by QIIME 2 developers who are not ready to include their resource on the <a href="https://docs.qiime2.org/2017.12/data-resources/">QIIME 2 Data Resources page</a> yet.
Tutorials The Community Tutorials category is for sharing QIIME 2 tutorials that are not part of the official <a href="https://docs.qiime2.org/2017.7/tutorials/">QIIME 2 documentation</a>. These may be contributed by members of the QIIME 2 user community, or by plugin developers who are drafting new tutorials that may ultimately be included in the QIIME 2 documentation.
Translations This category contains translations of the QIIME 2 documentation in different languages, developed and contributed by members of the QIIME 2 user community. The translated documentation should be considered supplemental to the primary documentation at <a href="https://docs.qiime2.org">https://docs.qiime2.org</a>. If the translated documentation is popular, we may eventually work towards including it at <a href="https://docs.qiime2.org">https://docs.qiime2.org</a>.

About the Community Contributions category [Community Contributions] (1)
Q2-perc-norm community plugin [Plugins] (2)
Tutorial: Integrating QIIME2 and R for data visualization and analysis using qiime2R [Tutorials] (1)
Exporting and modifying BIOM tables (e.g. adding taxonomy annotations) [Tutorials] (1)
Moving Pictures Python API tutorial (QIIME2 2018.4) [Tutorials] (1)
Developing and troubleshooting a QIIME 2 plugin [Community Contributions] (1)
Silva 132 classifiers [Data resources] (7)
EMP protocols are published on protocols.io [Data resources] (1)
SILVA 128 classifiers available for download [Data resources] (1)
Demultiplexing and Trimming Adapters from Reads with q2-cutadapt [Tutorials] (4)
Get fully annotated `.biom` tables from Qiime 2 to Qiime 1 (and e.g. Phyloseq) [Community Contributions] (1)
Available: Pre-trained classifier of V3-V4 (341F, 805R) region with gg_99 [Community Contributions] (4)
Alpha and Beta Diversity Explanations and Commands [Tutorials] (8)
UNITE (ver 7.2 2017-12-01) Classifiers for QIIME2 (ver. 2017.12) Available Here [Data resources] (4)
Clustering sequences into OTUs using q2-vsearch [Tutorials] (2)
Automatic Manifest Maker in R [Tutorials] (1)
Q2-fragment-insertion community plugin [Plugins] (8)
Analyzing paired end reads in QIIME 2 [Tutorials] (10)
Identifying and filtering chimeric feature sequences with vsearch [Tutorials] (2)
Gneiss tutorial [Tutorials] (2)
ANCOM tutorial: Moving Pictures of the Human Microbiome dataset [Tutorials] (2)
QIIME2中文帮助文档 (Chinese Manual) [Translations] (1)