Community Contributions


Data resources The Community Data Resources category is for sharing QIIME 2 resources, such as trained feature classifiers or reference databases, that are not listed on the <a href="https://docs.qiime2.org/2017.12/data-resources/">QIIME 2 Data Resources page</a>. These may be contributed by members of the QIIME 2 developer or user community, or by QIIME 2 developers who are not ready to include their resource on the <a href="https://docs.qiime2.org/2017.12/data-resources/">QIIME 2 Data Resources page</a> yet. Translations This category contains translations of the QIIME 2 documentation in different languages, developed and contributed by members of the QIIME 2 user community. The translated documentation should be considered supplemental to the primary documentation at <a href="https://docs.qiime2.org">https://docs.qiime2.org</a>. If the translated documentation is popular, we may eventually work towards including it at <a href="https://docs.qiime2.org">https://docs.qiime2.org</a>. Plugins The Community Plugins category is for sharing QIIME 2 plugins that are not part of the <a href="https://forum.qiime2.org/t/how-the-forum-works/7085#heading--glossary-core-distribution">QIIME 2 Core Distribution</a>. These may be contributed by members of the QIIME 2 plugin developer community, or by QIIME 2 developers who are not ready to transition their methods into the core distribution yet (e.g., because the methods and visualizers are experimental, or because the plugin or some of its dependencies are not conda installable). Tutorials The Community Tutorials category is for sharing QIIME 2 tutorials that are not part of the official <a href="https://docs.qiime2.org/2017.7/tutorials/">QIIME 2 documentation</a>. These may be contributed by members of the QIIME 2 user community, or by plugin developers who are drafting new tutorials that may ultimately be included in the QIIME 2 documentation.
Topic Replies Created
About the Community Contributions category 1 February 14, 2018
Exporting and modifying BIOM tables (e.g. adding taxonomy annotations) 10 April 2, 2018
Tutorial: Integrating QIIME2 and R for data visualization and analysis using qiime2R 5 May 11, 2018
Get fully annotated `.biom` tables from Qiime 2 to Qiime 1 (and e.g. Phyloseq) 3 March 21, 2018
Q2-perc-norm community plugin 6 April 25, 2018
q2-SCNIC: A tool for making correlation networks, finding modules of observations and summarizing them 20 September 20, 2018
Demultiplexing and Trimming Adapters from Reads with q2-cutadapt 6 December 22, 2017
Q2-alignment: reference based alignment using SINA 2 September 28, 2018
Robust Aitchison PCA Beta Diversity with DEICODE 4 February 12, 2019
UNITE (v.8.0 2018-11-18) Classifiers for QIIME2 Available Here 1 March 13, 2019
Importing dada2 and Phyloseq objects to QIIME 2 5 June 22, 2018
Qiime2 compatible oceanic databases - PR2 and Phytoref 3 November 29, 2018
Automatic Manifest Maker in Python3 1 March 2, 2019
Q2-Brocc: Community Tutorial 2 October 1, 2018
Q2-corncob: Community Tutorial 5 September 21, 2018
Silva 132 classifiers 16 April 7, 2018
QIIME 2用户文档. 11数据筛选Filtering data(2018.11) 1 January 28, 2019
QIIME 2用户文档. 13数据评估和质控Evaluating and controlling(2018.11) 1 January 28, 2019
QIIME 2用户文档. 14机器学习预测样品元数据分类和回归q2-sample-classifier(2018.11) 1 January 28, 2019
QIIME 2用户文档. 12训练特征分类器Training feature classifiers(2018.11) 1 January 28, 2019
Q2-ITSxpress: A tutorial on a QIIME 2 plugin to trim ITS sequences 28 August 27, 2018
Fungal ITS analysis tutorial 1 December 9, 2018
QIIME 2用户文档. 8数据导入Importing data(2018.11) 1 January 4, 2019
QIIME 2用户文档. 7差异丰度分析gneiss(2018.11) 1 January 4, 2019
QIIME 2用户文档. 10元数据Metadata(2018.11) 1 January 4, 2019
QIIME 2用户文档. 9数据导出Exporting data(2018.11) 1 January 4, 2019
QIIME 2用户文档. 5粪菌移植分析练习Fecal microbiota transplant (FMT) study(2018.11) 1 December 30, 2018
QIIME 2用户文档. 6沙漠土壤分析Atacama soil(2018.11) 1 December 30, 2018
Qiime 2用户文档. 3老司机上路指南(2018.11) 1 December 25, 2018
QIIME 2用户文档. 4人体各部位微生物组分析实战Moving Pictures(2018.11) 1 December 25, 2018